![]() * restoring previous 'C:/Users/emanu/OneDrive/Documents/R/win-library/3. * removing 'C:/Users/emanu/OneDrive/Documents/R/win-library/3.6/glue' Make: *** Error 127ĮRROR: compilation failed for package 'glue' Sh: C:/Program: No such file or directory ** package 'glue' successfully unpacked and MD5 sums checkedĬ:/Program Files/R/R-3.6.3/Rtools/mingw_32/bin/gcc -I"C:/PROGRA~1/R/R-36~1.3/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c glue.c -o glue.o There is a binary version available but the source version is later:Ĭontent type 'application/x-gzip' length 97667 bytes (95 KB) Installing package into ‘C:/Users/emanu/OneDrive/Documents/R/win-library/3.6’ Sorry I'm super rookie on R and programming > install.packages("glue") So you really want to focus on sorting that out first, and hopefully installation of DESeq2 will just follow smoothly. This field value can be considered to be "", i.e., an empty string.Hi, I can't install the "glue" package (which I need to install "dplyr"), R tell me that the compilation failed and something about a non-zero exit status. The message ERROR: dependency ‘RcppArmadillo’ is not available for package ‘DESeq2’ tells you that the reason DESeq2 isn't being installed is because RcppArmadillo isn't available. If the field value is equal to an empty text (i.e., you don't see a value at all, not even NA), then it is likely that the field contained data, but that this has been cleared again. In other words, the field never contained any data for this particular record. If a field value is equal to NA in R, it means that the field never had a value. What is the difference between the two values? This is not an error, neither is it random. Sometimes, the output of a call can return both blanks and NAs. Remotes::install_github("castoredc/castoRedc") Output containing blanks and NAs ![]() Install devtools and then use it to install the requested package: Remotes::install_github("castoredc/castoRedc", dependencies=TRUE) To resolve this you can use one of the following methods:įorce the installation of the dependencies at the same time by adding dependencies=TRUE : The most common cause when installing the castoRedc package is the existence of unresolved dependencies. There can be different reasons why this happens, which means there are also different ways to fix this. Receiving this message means that the package was not installed. This message can appear as the result of the installation of a package like Castor EDC : Error: Failed to install 'castoRedc' from GitHub: (converted from warning) installation of package 'later' had non-zero exit status Note: the numbers will be different depending on the dataset When the sizes are incompatible, the following error will appear: Error: Can't recycle `.1` (size 971) to match `.2` (size 0). ![]() Recycle() is a function that R applies to match the length of two arguments, usually vectors. To avoid issues due to this mismatch, keep your packages updated, especially the ones that the Castor EDC package depends on: dplyr, tidyr, purr, glue, jsonlite, and httr. It is thus possible to have out-of-date packages installed that will impact the functioning of other packages. Keep packages updatesĪs a general concept it is important to note that R packages get updates separately. A few days ago, dplyr was running flawlessly, but 'disappeared' from my Package list (RStudio Version ). This article contains solutions to the most common error messages and issues when using the Castor EDC R Package. installation of package ‘dplyr’ had non-zero exit status 3 0 Currently running ubuntu 14.04 LTS 64-bit.
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |